Files in cboettig/taxadb
A High-Performance Local Taxonomic Database Interface
.Rbuildignore
.github/.gitignore
.github/workflows/R-CMD-check.yaml
.gitignore
.pbattributes
.travis.yml
CODE_OF_CONDUCT.md
CRAN-RELEASE
CRAN-SUBMISSION
DESCRIPTION
LICENSE
LICENSE.md
NAMESPACE
NEWS.md
R/clean_names.R
R/filter_by.R
R/filter_common.R
R/filter_id.R
R/filter_name.R
R/filter_rank.R
R/fuzzy_filter.R
R/get_ids.R
R/get_names.R
R/handling-duplicates.R
R/parse_schema.R
R/sysdata.rda
R/taxa_tbl.R
R/taxadb_dir.R
R/td_connect.R
R/td_create.R
R/tl_import.R
R/utils.R
README.Rmd
README.md
appveyor.yml
codecov.yml
codemeta.json
cran-comments.md
data-raw/README.md
data-raw/extdata.R
data-raw/sysdata.R
data-raw/testing-ott.R
docs/.htaccess
docs/index.html
inst/CITATION
inst/WORDLIST
inst/examples/docker.R
inst/examples/jq.R
inst/examples/synonyms.R
inst/examples/taxa-bottom-up.json
inst/examples/taxa-flat.json
inst/examples/taxa-top-down.json
inst/examples/taxadb_github_releases.R
inst/extdata/bbs.tsv
inst/extdata/common_itis_test.parquet
inst/extdata/common_itis_test.tsv.bz2
inst/extdata/dwc_itis_test.parquet
inst/extdata/dwc_itis_test.tsv.bz2
inst/extdata/primates.tsv.bz2
inst/extdata/prov.json
inst/extdata/schema.json
inst/extdata/status_data.tsv
inst/extdata/trait_data.tsv
man/clean_names.Rd
man/common_contains.Rd
man/common_starts_with.Rd
man/figures/logo.svg
man/filter_by.Rd
man/filter_common.Rd
man/filter_id.Rd
man/filter_name.Rd
man/filter_rank.Rd
man/fuzzy_filter.Rd
man/get_ids.Rd
man/get_names.Rd
man/name_contains.Rd
man/name_starts_with.Rd
man/taxa_tbl.Rd
man/taxadb_dir.Rd
man/td_connect.Rd
man/td_create.Rd
man/td_disconnect.Rd
man/tl_import.Rd
notebook/algae-explore.Rmd
notebook/algae.Rmd
notebook/bird_issues.R
notebook/clean-names-db-column.R
notebook/drafts/crosswalk.Rmd
notebook/drafts/taxald.Rmd
notebook/fuzzy-matching.Rmd
notebook/fuzzy.R
notebook/globi-debug.R
notebook/globi.R
notebook/join-all-providers.R
notebook/taxa-db.R
notebook/taxa-rdf.R
notebook/test_db.R
paper/bbs.txt
paper/coverletterMEE.Rmd
paper/coverletterMEE.pdf
paper/manuscript.Rmd
paper/manuscript.pdf
paper/preamble.tex
paper/refs.bib
paper/svglov3.clo
paper/svjour3.cls
pkgdown/favicon/apple-touch-icon-120x120.png
pkgdown/favicon/apple-touch-icon-152x152.png
pkgdown/favicon/apple-touch-icon-180x180.png
pkgdown/favicon/apple-touch-icon-60x60.png
pkgdown/favicon/apple-touch-icon-76x76.png
pkgdown/favicon/apple-touch-icon.png
pkgdown/favicon/favicon-16x16.png
pkgdown/favicon/favicon-32x32.png
pkgdown/favicon/favicon.ico
taxadb.Rproj
tests/spelling.R
tests/testthat.R
tests/testthat/setup-test_db.R
tests/testthat/teardown-tests.R
tests/testthat/test-clean_names.R
tests/testthat/test-fast.R
tests/testthat/test-filter_by.R
tests/testthat/test-fuzzy_filter.R
tests/testthat/test-get_ids.R
tests/testthat/test-get_names.R
tests/testthat/test-handling-duplicates.R
tests/testthat/test-taxadb.R
tests/testthat/test-tl_import.R
vignettes/.gitignore
vignettes/articles/intro.Rmd
vignettes/articles/intro.Rmd.orig
vignettes/backends.Rmd
vignettes/data-sources.Rmd
