HafnerBreastCancerData: Obtain the Hafner BreastCancer data

In celsomilne/scSpatial: Single-Cell Spatial Data

Description

Download and cache the Hafner breast cancer single-cell spatial (scSpatial) dataset from ExperimentHub, returning a SegmentedCells object for further use.

Usage

HafnerBreastCancerData(...)

Details

This function provides the breast cancer scSpatial data from Hafner et al. (2016) in the form of a SegmentedCells object.

Value

A SegmentedCells object.

Author(s)

Celso Milne

References

Hafner, M., Niepel, M., Chung, M. and Sorger, P., 2016. Growth rate inhibition metrics correct for confounders in measuring sensitivity to cancer drugs. Nature Methods, 13(6), pp.521-527. Available at: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC4887336/.

Examples

se <- HafnerBreastCancerData()

celsomilne/scSpatial documentation built on Aug. 11, 2020, 9:51 a.m.