In certara/pmxpartabc: Parameter Tables for PMx Analyses

pmxpartabc

An R package for parameter estimate tables.

Installation

This package is not yet on CRAN. To install the latest development version directly from GitHub:

require(remotes)
devtools::install_github("certara/pmxpartabc")

Usage

library(pmxpartabc)

output <- parframe2setup(run_dir = file.path(system.file(package = "pmxpartabc"), "examples"), 
                      run_prefix = "run", 
                      runno = "5",
                      bootstrap = TRUE,
                      run_dir.boot = file.path(system.file(package = "pmxpartabc"), "examples", "bootstrap_dir2"),
                      runno.boot = "5boot",
                      conf.level = 0.95, 
                      min_suc = TRUE)

df <- parframe(out=output[[1]], meta=output[[2]], bootstrap = TRUE)  

table <- pmxpartab(df, 
                   meta = output[[2]],
                   columns=c(value="Estimate", boot.median = "Bootstrap Estimate", rse="RSE%", ci95="95%CI", shrinkage="Shrinkage")
                   )

print(table)