esbl_tests: Example Data Set with ESBL Test Outcomes

In certe-medical-epidemiology/certestats: A Certe R Package for Statistical Modelling

Example Data Set with ESBL Test Outcomes

Description

This data set contains phenotypic test outcomes of the presence of ESBL (Extended Spectrum Beta-Lactamase) genes, with the minimum inhibitory concentrations (MIC, in mg/L) for 17 antibiotic drugs.

Usage

esbl_tests

Format

A tibble/data.frame with 500 observations and 19 variables:

• esbl: Outcome of ESBL test (TRUE (n = 250), FALSE (n = 250))

• genus: Taxonomic genus of the bacteria (Citrobacter (n = 42), Enterobacter (n = 30), Escherichia (n = 301), Klebsiella (n = 70), Morganella (n = 24), Proteus (n = 33))

• AMC: MIC values of amoxicillin/clavulanic acid

• AMP: MIC values of ampicillin

• TZP: MIC values of piperacillin/tazobactam

• CXM: MIC values of cefuroxime

• FOX: MIC values of cefoxitin

• CTX: MIC values of cefotaxime

• CAZ: MIC values of ceftazidime

• GEN: MIC values of gentamicin

• TOB: MIC values of tobramycin

• TMP: MIC values of trimethoprim

• SXT: MIC values of trimethoprim/sulfamethoxazole

• NIT: MIC values of nitrofurantoin

• FOS: MIC values of fosfomycin

• CIP: MIC values of ciprofloxacin

• IPM: MIC values of imipenem

• MEM: MIC values of meropenem

• COL: MIC values of colistin

Examples

print(esbl_tests, n = 5)

certe-medical-epidemiology/certestats documentation built on Nov. 9, 2024, 8:15 p.m.