fit_sr_base: Fit stock recruit model using maximum likelihood estimation
In cfree14/splink: Covariate-linked biomass dynamic models
Description
Usage
Arguments
Value
Examples
Description
This function fits a Ricker or Beverton-Holt stock recruitment model using maximum likelihood estimation in TMB.
Usage
1
fit_sr_base(data, b_col, r_col, type)
Arguments
data
A data frame
type
"ricker" or "bev-holt"
Value
A list containing: (1) the data; (2) the model fit; and (3) the standard error report.
Examples
1
2
3
4
5
data <- splink::ram_wc
output <- splink::fit_sr(data=data, b_col="b_scaled", r_col="r_scaled", type="ricker")
results <- splink::get_results(output)
splink::plot_results(results)
splink::plot_fits_sr(output, plotdir="~/Desktop", plotname="test.pdf")
cfree14/splink documentation built on Dec. 19, 2021, 2:57 p.m.
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Description Usage Arguments Value Examples
Description
This function fits a Ricker or Beverton-Holt stock recruitment model using maximum likelihood estimation in TMB.
Usage
1 | fit_sr_base(data, b_col, r_col, type)
|
Arguments
data |
A data frame |
type |
"ricker" or "bev-holt" |
Value
A list containing: (1) the data; (2) the model fit; and (3) the standard error report.
Examples
1 2 3 4 5 | data <- splink::ram_wc
output <- splink::fit_sr(data=data, b_col="b_scaled", r_col="r_scaled", type="ricker")
results <- splink::get_results(output)
splink::plot_results(results)
splink::plot_fits_sr(output, plotdir="~/Desktop", plotname="test.pdf")
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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