Man pages for cghaase/GARPTools
Tools for GARP Data Prep and Model Evaluation
| aucGARP | Area Under the Receiver Operating Characteristic (ROC) curve... |
| aucRatio | Ratio of Area Under the Receiver Operating Characteristic... |
| carolinas_boundary | State boundary of North and South Carolina, United States |
| centroid | Returns centroid coordinates of raster cells containing... |
| checkData | Check that input points overlap with input rasters |
| commissionGARP | Calculates commission metrics of model outputs |
| confuseMatrix | Calculates the confusion matrix |
| env_layers | Environmental layers from WorldClim |
| extractRules | Pull rulesets created by GARP |
| findModRules | Pull rulesets created by GARP |
| getMedMinMax | Pull rulesets created by GARP |
| nc_boundary | State boundary of North Carolina, United States |
| omissionGARP | Calculates omission metrics of model outputs |
| plotRange | Plots the rescaled median ranges for environment variables |
| plotROC | Plots the Receiver Operating Charactersitic (ROC) Curve |
| prevalence | Calculate the prevalence of each environmental covariate in... |
| rasterPrep | Prepares input rasters for GARP |
| rescale | Rescales environmental variables from 0 to 1 |
| seAUC | Calculates the standard error of the AUC |
| splitData | Splits presence locations into training and testing data sets... |
| sumRasters | Sums rasters of the best subset models output from GARP |
| tasks_layers | ESRI output grids from a single GARP experiment |
| totPresRules | Get the total number of dominant presence rules in the... |
| unimportIdx | Calculates the unimportance index of each environmental... |
| wGARP | Calculates the Wilcoxon test statistic |
| wtdeer_df | Example white-tailed deer GPS locations |
| wtdeer_locations | Spatial data of white-tailed deer GPS locations |
| zAUC | Calculates the z-score associated with the AUC |
