GMHI: GMHI multi-study cohort
In chanw0/MRS: Microbial Risk Score Framework
GMHI R Documentation
GMHI multi-study cohort
Description
A datalist has an integrative discovery dataset
and an independent validation dataset from the GMHI multi-study cohort.
Usage
GMHI
Format
A data list with two datasets:
- discovery.data
a phyloseq-class object, which consists of a feature table and a sample metadata.
This dataset is extracted from the integrative discovery dataset in
the GMHI multi-study cohort. Specifically, there are 4347 subjects and 313 species.
There are two group statues in the sample data. Group variable indicates healthy or nonhealthy status for each subject. Group1 indicates healthy or disease condition in details.
- validation.data
a phyloseq-class object, which consists of a feature table and a sample metadata.
This dataset is extracted from the independent validation dataset in
the GMHI multi-study cohort. Specifically, there are 782 subjects and 576 species.
There are two group statues in the sample data. Group variable indicates health or nonhealthy status for each subject. Group1 indicates healthy or disease condition in details.
chanw0/MRS documentation built on Aug. 25, 2023, 3:29 a.m.
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| GMHI | R Documentation |
GMHI multi-study cohort
Description
A datalist has an integrative discovery dataset and an independent validation dataset from the GMHI multi-study cohort.
Usage
GMHI
Format
A data list with two datasets:
- discovery.data
a phyloseq-class object, which consists of a feature table and a sample metadata. This dataset is extracted from the integrative discovery dataset in the GMHI multi-study cohort. Specifically, there are 4347 subjects and 313 species. There are two group statues in the sample data. Group variable indicates healthy or nonhealthy status for each subject. Group1 indicates healthy or disease condition in details.
- validation.data
a phyloseq-class object, which consists of a feature table and a sample metadata. This dataset is extracted from the independent validation dataset in the GMHI multi-study cohort. Specifically, there are 782 subjects and 576 species. There are two group statues in the sample data. Group variable indicates health or nonhealthy status for each subject. Group1 indicates healthy or disease condition in details.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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