Man pages for chaolinzhanglab/splicescope
Splicescope
| beta.predict | predict neuronal maturation with all module exons using beta... |
| extreme.replace | Replace 0 and 1 in splicing matrix with appoximate value |
| get.dis | Calculate distance between reference sample and predicated... |
| get.dis.rbp | Calculate distance between reference sample and predicated... |
| get.htmldf | generate html for data frame |
| get.modulemat | Output module exons matrix with or without subtraction of... |
| knn.flex.reg | KNN predictor |
| maturation.predict | Pipeline function for neuronal prediction |
| na.replace | Replace NA values with mean of reference sample |
| output2html | generate html file |
| pcaplot | Plot PCA scatter plot using ggplot2 |
| prefilter | Filter module exons by ID |
| rbp.beta.predict | predict neuronal maturation with all module exons using beta... |
| rbp.predict | Pipeline function for neuronal prediction with RBP sepcific... |
| splicescope | splicescope |
| submedian | Get matrix subtracted by second matrix's median |
