dsm_plot: Off-diagonal Plotting Function for Dissimlarity Matricies
In chavezlab/csnl: CSN Lab Helper Functions
dsm_plot R Documentation
Off-diagonal Plotting Function for Dissimlarity Matricies
Description
This function will plot the off-diagonal elements of a dissmilarity matrix.
Usage
dsm_plot(dsm, col_n = 8, color_dir = 1, rev_fac = FALSE, melt = TRUE)
Arguments
dsm
a (dis)similarity matrix
col_n
number of colors used in palette
color_dir
direction of the color ramp. 1 == forward, -1 == reverse
rev_fac
logical indicating whether to reverse the factor level order
melt
logical indicating whether or not to melt the matrix into a data frame prior to plotting
Author(s)
Robert S. Chavez
Examples
cars_dsm <- 1-cor(mtcars)
dsm_plot(cars_dsm)
chavezlab/csnl documentation built on June 12, 2022, 10:09 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
| dsm_plot | R Documentation |
Off-diagonal Plotting Function for Dissimlarity Matricies
Description
This function will plot the off-diagonal elements of a dissmilarity matrix.
Usage
dsm_plot(dsm, col_n = 8, color_dir = 1, rev_fac = FALSE, melt = TRUE)
Arguments
dsm |
a (dis)similarity matrix |
col_n |
number of colors used in palette |
color_dir |
direction of the color ramp. 1 == forward, -1 == reverse |
rev_fac |
logical indicating whether to reverse the factor level order |
melt |
logical indicating whether or not to melt the matrix into a data frame prior to plotting |
Author(s)
Robert S. Chavez
Examples
cars_dsm <- 1-cor(mtcars) dsm_plot(cars_dsm)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.