Use name or other id (pubchem, kegg…) to find in which pathways a metabolite is from. Query different databases such as: Kegg, SMPDB, HMDB and Biocyc. Also include functions for batch query to find every pathway from different database, for each metabolite of a list. Can query specific databases (kegg) to find the pathway who has the most metabolite from query. Also, can output result in latex and csv.
Package details |
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Author | Sarah Cherkaoui |
Maintainer | Sarah Cherkaoui <cherkaos@gmail.com> |
License | UCDavis |
Version | 1.0 |
Package repository | View on GitHub |
Installation |
Install the latest version of this package by entering the following in R:
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