herit_per_chr: Estimate the heritability of a phenotype on each chromosome.
In churchill-lab/qtl2tricks: Tricks for Karl Broman's qtl2.
Description
Usage
Arguments
Value
View source: R/herit_per_chr.R
Description
Estimate the heritability of a phenotype on each chromosome.
Usage
1
herit_per_chr(data, K)
Arguments
data
numeric matrix containing samples in rows and phenotypes and covariates in columns. The phenotype should be in column 1 and the covariates should be generated from model.matrix() in the remaining columns.
K
list containing kinship matrices for each chromosome. NOTE: these should be made using qtl2::calc_kinship(genoprobs, type = "chr")
Value
numeric matrix containing phenotypes in rows and kinship estimates per chromosome in columns.
churchill-lab/qtl2tricks documentation built on May 20, 2019, 1:13 p.m.
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Description Usage Arguments Value
View source: R/herit_per_chr.R
Description
Estimate the heritability of a phenotype on each chromosome.
Usage
1 | herit_per_chr(data, K)
|
Arguments
data |
numeric matrix containing samples in rows and phenotypes and covariates in columns. The phenotype should be in column 1 and the covariates should be generated from model.matrix() in the remaining columns. |
K |
list containing kinship matrices for each chromosome. NOTE: these should be made using qtl2::calc_kinship(genoprobs, type = "chr") |
Value
numeric matrix containing phenotypes in rows and kinship estimates per chromosome in columns.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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