write.markups.fcsv: Export landmark data into FCSV file

In chz31/SlicerMorphR: Import SlicerMorph data into R

Export landmark data into FCSV file

Description

This function export landmark coordinates into an FCSV file By default coordinates are assumed to be written in LPS, but can be change to RAS using the @param coord option. a fcsv file,

Usage

write.markups.fcsv(pts = NULL, outfile = NULL, coord = "LPS")

Arguments

pts	a matrix/array that contains landmark coordinates nrow = number of coordinates ncol = dimensions Row names are assigned from the labels in the FCSV file Column names are assigned as "x", "y", and "z", depending on the dimension
outfile	this parameter specifies a file to be created (e.g., a directory leads to a particular FCSV file; see example)

Value

A FCSV file of morphometric data
The label for each landmark is the rowname of the input landmark matrix

Examples

lms = read.markups.fcsv(file = url("https://raw.githubusercontent.com/SlicerMorph/SampleData/master/Gorilla_template_LM1.fcsv"))
write.markups.fcsv(pts=lms, outfile = "Your_Directory/test.fcsv", coord="LPS")

chz31/SlicerMorphR documentation built on Feb. 10, 2023, 11:56 p.m.