findForwardRelatedNetworkByGenes: Find Forward related Network By Genes

In clsdavid/FBNNet2_public: Fundamental Boolean Model and Networks

Find Forward related Network By Genes

Description

Find Forward related Network By Genes

Usage

findForwardRelatedNetworkByGenes(
  networks,
  target_gene_list = c(),
  regulationType = NULL,
  target_type = NULL,
  maxDeep = 1,
  next_level_mix_type = FALSE
)

Arguments

networks	The Fundamental Boolean Network
target_gene_list	The target genes
regulationType	The type of regulation either in 1 (Up regulation) or 0 (down regulation)
target_type	The boolean type of target genes either in 1 (Activation) or 0 (Inhibition)
maxDeep	The maximum layous that need to be drilled down.
next_level_mix_type	If TRUE, the next level will contain all type of connections.

clsdavid/FBNNet2_public documentation built on April 20, 2023, 4:36 p.m.