package: Full Genome Sequence for Cryptococcus neoformans var. grubii...

In cmatKhan/BSgenome.CneoformansVarGrubiiKN99: Full Genome Sequence for Cryptococcus neoformans var. grubii KN99 (ASM221672v1)

Full Genome Sequence for Cryptococcus neoformans var. grubii KN99 (ASM221672v1)

Description

Full genome sequences for Cryptococcus neoformans var. grubii KN99 (assembly ASM221672v1 assembly accession GCA_002216725.1).

Note

This BSgenome data package was made from the following source data files:

-- information not available --
  

See ?BSgenomeForge and the BSgenomeForge vignette (vignette("BSgenomeForge")) in the BSgenome software package for how to make a BSgenome data package.

Author(s)

The Bioconductor Dev Team

See Also

• BSgenome objects and the available.genomes function in the BSgenome software package.

• DNAString objects in the Biostrings package.

• The BSgenomeForge vignette (vignette("BSgenomeForge")) in the BSgenome software package for how to make a BSgenome data package.

Examples

BSgenome.CneoformansVarGrubiiKN99.NCBI.ASM221672v1
genome <- BSgenome.CneoformansVarGrubiiKN99.NCBI.ASM221672v1
head(seqlengths(genome))
genome$CP022321.1 # same as genome[["CP022321.1"]]

## ---------------------------------------------------------------------
## Genome-wide motif searching
## ---------------------------------------------------------------------
## See the GenomeSearching vignette in the BSgenome software
## package for some examples of genome-wide motif searching using
## Biostrings and the BSgenome data packages:
if (interactive())
    vignette("GenomeSearching", package="BSgenome")

cmatKhan/BSgenome.CneoformansVarGrubiiKN99 documentation built on March 30, 2022, 7:06 a.m.