read_fasta: Read a fasta file and convert it to tabseq
In cmkobel/tabseq: Fasta-Tidyverse Interface
read_fasta R Documentation
Read a fasta file and convert it to tabseq
Description
Takes the path to a fasta file. Loads the fasta file, and converts it to a tabseq table.
Usage
read_fasta(file, basename_only = T, remove_extension = F, skip = 0)
Arguments
file
The path to a fasta-file
basename_only
If TRUE, the full paths to the files will be truncated in favor of the basename only
skip
Skip this number of lines in the file before reading
Value
A tibble containing the respective records and sequences from the fasta-file, represented in the tabseq format.
Examples
my_sequences = read_tabseq("~/tabseq/examples/random.fasta")
cmkobel/tabseq documentation built on Nov. 18, 2022, 8:19 p.m.
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| read_fasta | R Documentation |
Read a fasta file and convert it to tabseq
Description
Takes the path to a fasta file. Loads the fasta file, and converts it to a tabseq table.
Usage
read_fasta(file, basename_only = T, remove_extension = F, skip = 0)
Arguments
file |
The path to a fasta-file |
basename_only |
If TRUE, the full paths to the files will be truncated in favor of the basename only |
skip |
Skip this number of lines in the file before reading |
Value
A tibble containing the respective records and sequences from the fasta-file, represented in the tabseq format.
Examples
my_sequences = read_tabseq("~/tabseq/examples/random.fasta")
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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