Man pages for cole-trapnell-lab/garnett
Automated cell type classification
| cell_rules | cell_rules class |
| check_markers | Check marker file |
| classify_cells | Classify cells from trained garnett_classifier |
| garnett_classifier | The garnett_classifier class |
| garnett-package | garnett |
| gene_rule-class | gene_rule class |
| get_classifier_references | Retrieve marker references from garnett_classifier |
| get_feature_genes | Extract feature genes |
| Parser | Parsing the Garnett marker file |
| plot_markers | Plot marker metrics |
| test_cds | Small test CDS object |
| test_classifier | Small test garnett_classifier object |
| train_cell_classifier | Train a cell type classifier |
