README.md
In colin-leeyc/CLpseudobulk: PseudoBulk analysis for scRNAseq
CLpseudobulk
Pseudobulk analysis for scRNAseq by creating artifical replicates by random sampling.
Subsequently able to iterate random sampling (bootstrapping) and workflow to robustly test the differential expression between conditions.
Please install the following packages in R prior to use:
SingleCellExperiment,
DESeq2,
forcats,
dplyr,
tibble.
To install:
devtools::install_github("colin-leeyc/CLpseudobulk")
colin-leeyc/CLpseudobulk documentation built on Nov. 28, 2022, 6:52 p.m.
R Package Documentation
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Note that we can't provide technical support on individual packages. You should contact the package authors for that.
CLpseudobulk
Pseudobulk analysis for scRNAseq by creating artifical replicates by random sampling. Subsequently able to iterate random sampling (bootstrapping) and workflow to robustly test the differential expression between conditions.
Please install the following packages in R prior to use:
SingleCellExperiment, DESeq2, forcats, dplyr, tibble.
To install: devtools::install_github("colin-leeyc/CLpseudobulk")
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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