splineSmoother: Cubic smoothing spline fitting function for batch effect...
In computational-metabolomics/sbcms: Signal batch correction for (LC)-MS data
Description
Usage
Arguments
Value
Description
Cubic smoothing spline fitting function for batch effect correction
Usage
1
splineSmoother(x, y, newX, log = log, a = 1, spar, verbose = FALSE)
Arguments
x
QC sample measurement order indices.
y
Signal intensities.
newX
Range of sample indices to predict.
log
TRUE or FALSE to perform the signal correction fit on the log
scaled data. Default is TRUE.
a
log scaling offset.
spar
Smoothing parameter of the fitted curve. Should be in the range
0 to 1. If set to 0 it will be estimated using leave-one-out
cross-validation.
verbose
If set to TRUE will return messages from smooth.spline
fit funtion
Value
vector of cubic smoothing spline fitted values
computational-metabolomics/sbcms documentation built on June 17, 2021, 12:22 a.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Arguments Value
Description
Cubic smoothing spline fitting function for batch effect correction
Usage
1 | splineSmoother(x, y, newX, log = log, a = 1, spar, verbose = FALSE)
|
Arguments
x |
QC sample measurement order indices. |
y |
Signal intensities. |
newX |
Range of sample indices to predict. |
log |
TRUE or FALSE to perform the signal correction fit on the log scaled data. Default is TRUE. |
a |
log scaling offset. |
spar |
Smoothing parameter of the fitted curve. Should be in the range 0 to 1. If set to 0 it will be estimated using leave-one-out cross-validation. |
verbose |
If set to TRUE will return messages from smooth.spline fit funtion |
Value
vector of cubic smoothing spline fitted values
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.