Man pages for computational-metabolomics/struct
Statistics in R Using Class-based Templates
| as.code | Convert to code |
| as_data_frame | convert to data.frame |
| as.DatasetExperiment | Convert a SummarizedExperiment to DatasetExperiment |
| as.DatasetExperiment-SummarizedExperiment-method | Convert a SummarizedExperiment to DatasetExperiment |
| as.SummarizedExperiment | Convert a DatasetExperiment to a SummarizedExperiment |
| as.SummarizedExperiment-DatasetExperiment-method | Convert a DatasetExperiment to SummarizedExperiment |
| autocompletion | autocompletion |
| cash-ontology_list-method | Get/set ontology_list slots |
| cash-ontology_term-method | Get/set ontology term slots |
| cash-set-struct_class-method | Get/set parameter or output values |
| cash-struct_class-method | Get/set parameter or output values |
| chart | Constructor for struct chart objects |
| chart_example | example chart object |
| chart_names | chart names |
| chart_plot | chart_plot |
| citations | Citations for an object |
| c-ontology_list-method | catenate ontology_lists |
| entity | get the max value vector length for an entity |
| entity_stato | entity_stato class |
| enum | Enum objects |
| enum_stato | enum_stato class |
| example_iterator | Example iterator |
| example_model | Example model |
| export_data | write a dataset object to file |
| get_description | Get struct object help description |
| iris_DatasetExperiment | Fisher's Iris data |
| is_output | Verify output |
| is_param | Verify parameter |
| iterator | Run iterator |
| libraries | Libraries for an object |
| metric | Calculate metric |
| model | model class |
| model_apply | Apply a model |
| model_reverse | Reverse preprocessing |
| models | Get/set models of a model_seq |
| model_seq | model_seq class |
| new_struct | Generate a 'struct' object from a Class |
| ontology | Ontology for an object |
| optimiser | optimiser class |
| output_ids | Output identifiers |
| output_list | output list |
| output_name | output name |
| output_obj | Output objects |
| output_value | output values |
| param_ids | Parameter identifiers |
| param_list | Parameter list |
| param_name | Parameter name |
| param_obj | Parameter objects |
| param_value | Parameter values |
| predict | Model prediction |
| predicted | Prediction output |
| predicted_name | Predicted output name |
| preprocessing | preprocessing class |
| resampler | resampler class |
| result | Iterator result |
| result_name | get/set output name as prediction output for a model |
| seq_in | Sequence input |
| set_obj_method | update method for a struct object |
| set_obj_show | a helper function to update the show method for a struct... |
| set_struct_obj | define a new struct object |
| stato | get the stato_id for an object |
| struct_class | Constructor for struct_class objects |
| struct_class-class | 'struct_class' object definition |
| struct_DatasetExperiment | DatasetExperiment class |
| struct-package | struct: Statistics in R Using Class-based Templates |
| struct_template | StRUCT templates |
| test_metric | Example metric |
| train | Train a model |
