lagosus_compile: Compile LAGOSUS data

In cont-limno/LAGOSUS: Interface to the Lake Multi-Scaled Geospatial and Temporal Database

Compile LAGOSUS data

Description

Compile LAGOSUS data from component flat files. This function should rarely be called directly outside of manual updating of source data.

Usage

lagosus_compile(
  locus_version = NA,
  locus_folder = NA,
  locus_overwrite = FALSE,
  limno_version = NA,
  limno_folder = NA,
  limno_overwrite = FALSE,
  geo_version = NA,
  geo_folder = NA,
  geo_overwrite = FALSE,
  depth_version = NA,
  depth_folder = NA,
  depth_overwrite = FALSE,
  dest_folder = NA
)

Arguments

locus_version	character LAGOSUS database version string
locus_folder	file.path to locus export folder
locus_overwrite	logical overwrite existing data?
limno_version	character LAGOSUS database version string
limno_folder	file.path to limno export folder
limno_overwrite	logical overwrite existing data?
geo_version	character LAGOSUS database version string
geo_folder	file.path to geo export folder
geo_overwrite	logical overwrite existing data?
depth_version	character LAGOSUS database version string
depth_folder	file.path to depth export folder
depth_overwrite	logical overwrite existing data?
dest_folder	file.path recommended to set as the path returned by lagosus_path

Examples

## Not run: 
lagosus_compile(
   locus_version = "1.1",
   locus_folder = "~/Downloads/LAGOS-US-LOCUS-EXPORT",
   depth_version = "0",
   depth_folder = "~/Downloads/LAGOS-US-DEPTH-EXPORT",
   dest_folder = lagosus_path())

lagosus_compile(
   geo_version = "1.0",
   geo_folder = "~/Downloads/LAGOSUS_GEO/GEO_EXPORT_BETA_v1",
   dest_folder = lagosus_path(),
   geo_overwrite = TRUE)

## End(Not run)

cont-limno/LAGOSUS documentation built on Aug. 24, 2023, 10:01 a.m.