remodel: A function to model foldchange variance along several studies...
In csbl-usp/MetaVolcanoR: Gene Expression Meta-analysis Visualization Tool

A function to model foldchange variance along several studies This function calculate the REM-summary fold-change

1	remodel(gene, foldchangecol, vcol)

`gene`	named vector with foldchanges and variances <vector<
`foldchangecol`	the column name of the foldchange variable <string>
`vcol`	name of the fold change variance variable <string>

data.frame with REM results for a gene

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g <- data.frame('Symbol'="XGENE", 'Log2FC_1'=1.2, 'Log2FC'=0.8, 
                'vi_1'=0.01, 'vi_2'=0.1)
remodel(g, 'Log2FC', 'vi')

csbl-usp/MetaVolcanoR documentation built on Nov. 8, 2019, 8:53 p.m.

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