Man pages for csbl-usp/PubScore
Automatic calculation of literature relevance of genes

all_countsall_counts
dot-getSimulation_testAuxiliary function for the test method
dot-query_pubmed#' .query_pubmed
gene2pubmed_dbhuman genes on gene2pubmed_db
get_all_countsRetrieve the all_counts attribute
get_literature_scoreget_literature_score
getScoreRetrieve the literature_score attribute
heatmapVizRetrieve the heatmap attribute
hgcn_entrez_referencehgcn_entrez_reference
initialize-PubScore-methodinitialize
networkVizRetrieve the network attribute
plot_literature_graph#'plot_literature_graph
plot_literature_scoreplot_literature_score
pubscorePubScore fundamental analysis
PubScore-classAn S4 class to represent PubScore results
set_all_countsSet the all_counts attribute
test_scoreTest the literature enrichment score
csbl-usp/PubScore documentation built on June 17, 2020, 4:46 p.m.