gibbs: Gibbs sampling algorithm

Description Usage Arguments

View source: R/gibbs.R

Description

Gibbs sampling algorithm

Usage

1
  gibbs(y, iter, prior, burnin, thin, checkpoint = NULL)

Arguments

y

An hmm_fasta object

iter

number of iterations

prior

"prior_parameters" class object

burnin

amount of burnin required

thin

amount of thinning wanted

checkpoint

"hmm_checkpoint" object if checkpointing wanted or NULL if not wanted


csgillespie/HMMs documentation built on May 14, 2019, 12:11 p.m.