TabulaMurisSmartSeq2: Tabula Muris SmartSeq2 data
In csoneson/TabulaMurisData: 10x And SmartSeq2 Data From The Tabula Muris Consortium
TabulaMurisSmartSeq2 R Documentation
Tabula Muris SmartSeq2 data
Description
Read counts from the SmartSeq2 (on FACS-sorted cells) single-cell RNA-seq
data collected by the Tabula Muris Consortium. The object contains counts
for 23,433 features (23,341 genes and 92 ERCC spike-ins) in 53,760 cells.
Usage
TabulaMurisSmartSeq2(metadata = FALSE)
Arguments
metadata
Logical, whether only metadata should be returned
Format
SingleCellExperiment
Value
Returns a SingleCellExperiment object.
Author(s)
Charlotte Soneson
References
The Tabula Muris Consortium:
Single-cell transcriptomics of 20 mouse organs creates a Tabula Muris.
Nature doi:10.1038/s41586-018-0590-4 (2018).
Examples
TabulaMurisSmartSeq2(metadata = FALSE)
csoneson/TabulaMurisData documentation built on Oct. 30, 2023, 8:19 a.m.
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| TabulaMurisSmartSeq2 | R Documentation |
Tabula Muris SmartSeq2 data
Description
Read counts from the SmartSeq2 (on FACS-sorted cells) single-cell RNA-seq data collected by the Tabula Muris Consortium. The object contains counts for 23,433 features (23,341 genes and 92 ERCC spike-ins) in 53,760 cells.
Usage
TabulaMurisSmartSeq2(metadata = FALSE)
Arguments
metadata |
Logical, whether only metadata should be returned |
Format
SingleCellExperiment
Value
Returns a SingleCellExperiment object.
Author(s)
Charlotte Soneson
References
The Tabula Muris Consortium: Single-cell transcriptomics of 20 mouse organs creates a Tabula Muris. Nature doi:10.1038/s41586-018-0590-4 (2018).
Examples
TabulaMurisSmartSeq2(metadata = FALSE)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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