TabulaMurisSmartSeq2: Tabula Muris SmartSeq2 data

TabulaMurisSmartSeq2R Documentation

Tabula Muris SmartSeq2 data

Description

Read counts from the SmartSeq2 (on FACS-sorted cells) single-cell RNA-seq data collected by the Tabula Muris Consortium. The object contains counts for 23,433 features (23,341 genes and 92 ERCC spike-ins) in 53,760 cells.

Usage

    TabulaMurisSmartSeq2(metadata = FALSE)

Arguments

metadata

Logical, whether only metadata should be returned

Format

SingleCellExperiment

Value

Returns a SingleCellExperiment object.

Author(s)

Charlotte Soneson

References

The Tabula Muris Consortium: Single-cell transcriptomics of 20 mouse organs creates a Tabula Muris. Nature doi:10.1038/s41586-018-0590-4 (2018).

Examples

    TabulaMurisSmartSeq2(metadata = FALSE)

csoneson/TabulaMurisData documentation built on Nov. 2, 2024, 9:52 p.m.