sketchR-package: sketchR - an R interface for python subsampling/sketching...
In csoneson/sketchR: An R interface for python subsampling/sketching algorithms
sketchR-package R Documentation
sketchR - an R interface for python subsampling/sketching algorithms
Description
The sketchR package provides an R interface for various subsampling
algorithms implemented in python packages. Currently, interfaces to the
geosketch and scSampler python packages are implemented, in the functions
geosketch() and scsampler(), respectively. In addition the package also
provides diagnostic plots to evaluate the subsampling.
More details on how to get started and incorporate the subsampling into
an scRNA-seq workflow are provided in the vignette.
Author(s)
Charlotte Soneson
Michael Stadler
See Also
Useful links:
csoneson/sketchR documentation built on Dec. 24, 2024, 2:05 p.m.
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| sketchR-package | R Documentation |
sketchR - an R interface for python subsampling/sketching algorithms
Description
The sketchR package provides an R interface for various subsampling algorithms implemented in python packages. Currently, interfaces to the geosketch and scSampler python packages are implemented, in the functions geosketch() and scsampler(), respectively. In addition the package also provides diagnostic plots to evaluate the subsampling. More details on how to get started and incorporate the subsampling into an scRNA-seq workflow are provided in the vignette.
Author(s)
Charlotte Soneson
Michael Stadler
See Also
Useful links:
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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