Files in cukarthik/IUDEHREstimationStudy
A Package Skeleton for Comparative Effectiveness Studies
.gitignore
DESCRIPTION
HydraConfig.json
NAMESPACE
R/AdditionalAnalysis.R
R/CohortMethod.R
R/CreateAllCohorts.R
R/CreateCohorts.R
R/Diagnostics.R
R/Export.R
R/Main.R
R/Package.R
R/ShinyApps.R
R/SubmitResults.R
R/SynthesizePositiveControls.R
README.md
additionalEstimationPackage/IUDClaimsEstimation/DESCRIPTION
additionalEstimationPackage/IUDClaimsEstimation/HydraConfig.json
additionalEstimationPackage/IUDClaimsEstimation/IUDClaimsStudy.Rproj
additionalEstimationPackage/IUDClaimsEstimation/NAMESPACE
additionalEstimationPackage/IUDClaimsEstimation/R/AdditionalAnalysis.R
additionalEstimationPackage/IUDClaimsEstimation/R/CohortMethod.R
additionalEstimationPackage/IUDClaimsEstimation/R/CreateAllCohorts.R
additionalEstimationPackage/IUDClaimsEstimation/R/CreateCohorts.R
additionalEstimationPackage/IUDClaimsEstimation/R/Diagnostics.R
additionalEstimationPackage/IUDClaimsEstimation/R/Export.R
additionalEstimationPackage/IUDClaimsEstimation/R/Main.R
additionalEstimationPackage/IUDClaimsEstimation/R/Package.R
additionalEstimationPackage/IUDClaimsEstimation/R/ShinyApps.R
additionalEstimationPackage/IUDClaimsEstimation/R/SubmitResults.R
additionalEstimationPackage/IUDClaimsEstimation/R/SynthesizePositiveControls.R
additionalEstimationPackage/IUDClaimsEstimation/extras/CodeToRun.R
additionalEstimationPackage/IUDClaimsEstimation/extras/PackageMaintenance.R
additionalEstimationPackage/IUDClaimsEstimation/inst/cohorts/Alt_High_Grade_Cervical_Neoplasm.json
additionalEstimationPackage/IUDClaimsEstimation/inst/cohorts/NewUserCu-IUDHighGradeCIN.json
additionalEstimationPackage/IUDClaimsEstimation/inst/cohorts/NewUserCuCervicalCancerScreen.json
additionalEstimationPackage/IUDClaimsEstimation/inst/cohorts/NewUserCuIUD.json
additionalEstimationPackage/IUDClaimsEstimation/inst/cohorts/NewUserCuIUDPrimaryInvasiveCervicalCancer.json
additionalEstimationPackage/IUDClaimsEstimation/inst/cohorts/NewUserCuPreventiveHealth.json
additionalEstimationPackage/IUDClaimsEstimation/inst/cohorts/NewUserLNG-IUSHighGradeCIN.json
additionalEstimationPackage/IUDClaimsEstimation/inst/cohorts/NewUserLNG-IUSPrimaryInvasiveCervicalCancer.json
additionalEstimationPackage/IUDClaimsEstimation/inst/cohorts/NewUserLNGCervicalCancerScreen.json
additionalEstimationPackage/IUDClaimsEstimation/inst/cohorts/NewUserLNGIUS.json
additionalEstimationPackage/IUDClaimsEstimation/inst/cohorts/NewUserLNGMirenaLiletta.json
additionalEstimationPackage/IUDClaimsEstimation/inst/cohorts/NewUserLNGPreventiveHealth.json
additionalEstimationPackage/IUDClaimsEstimation/inst/cohorts/NewUserLNGSkylaKyleena.json
additionalEstimationPackage/IUDClaimsEstimation/inst/settings/CohortsToCreate.csv
additionalEstimationPackage/IUDClaimsEstimation/inst/settings/NegativeControls.csv
additionalEstimationPackage/IUDClaimsEstimation/inst/settings/StudySpecification.json
additionalEstimationPackage/IUDClaimsEstimation/inst/settings/TcosOfInterest.csv
additionalEstimationPackage/IUDClaimsEstimation/inst/settings/cmAnalysisList.json
additionalEstimationPackage/IUDClaimsEstimation/inst/shiny/EvidenceExplorer/DataPulls.R
additionalEstimationPackage/IUDClaimsEstimation/inst/shiny/EvidenceExplorer/EvidenceExplorer.Rproj
additionalEstimationPackage/IUDClaimsEstimation/inst/shiny/EvidenceExplorer/PlotsAndTables.R
additionalEstimationPackage/IUDClaimsEstimation/inst/shiny/EvidenceExplorer/Table1Specs.csv
additionalEstimationPackage/IUDClaimsEstimation/inst/shiny/EvidenceExplorer/global.R
additionalEstimationPackage/IUDClaimsEstimation/inst/shiny/EvidenceExplorer/server.R
additionalEstimationPackage/IUDClaimsEstimation/inst/shiny/EvidenceExplorer/ui.R
additionalEstimationPackage/IUDClaimsEstimation/inst/sql/sql_server/Alt_High_Grade_Cervical_Neoplasm.sql
additionalEstimationPackage/IUDClaimsEstimation/inst/sql/sql_server/CreateCohortTable.sql
additionalEstimationPackage/IUDClaimsEstimation/inst/sql/sql_server/CumulativeIncidence.sql
additionalEstimationPackage/IUDClaimsEstimation/inst/sql/sql_server/GetCounts.sql
additionalEstimationPackage/IUDClaimsEstimation/inst/sql/sql_server/GetCountsPerYear.sql
additionalEstimationPackage/IUDClaimsEstimation/inst/sql/sql_server/NegativeControlOutcomes.sql
additionalEstimationPackage/IUDClaimsEstimation/inst/sql/sql_server/NewUserCu-IUDHighGradeCIN.sql
additionalEstimationPackage/IUDClaimsEstimation/inst/sql/sql_server/NewUserCuCervicalCancerScreen.sql
additionalEstimationPackage/IUDClaimsEstimation/inst/sql/sql_server/NewUserCuIUD.sql
additionalEstimationPackage/IUDClaimsEstimation/inst/sql/sql_server/NewUserCuIUDPrimaryInvasiveCervicalCancer.sql
additionalEstimationPackage/IUDClaimsEstimation/inst/sql/sql_server/NewUserCuPreventiveHealth.sql
additionalEstimationPackage/IUDClaimsEstimation/inst/sql/sql_server/NewUserLNG-IUSHighGradeCIN.sql
additionalEstimationPackage/IUDClaimsEstimation/inst/sql/sql_server/NewUserLNG-IUSPrimaryInvasiveCervicalCancer.sql
additionalEstimationPackage/IUDClaimsEstimation/inst/sql/sql_server/NewUserLNGCervicalCancerScreen.sql
additionalEstimationPackage/IUDClaimsEstimation/inst/sql/sql_server/NewUserLNGIUS.sql
additionalEstimationPackage/IUDClaimsEstimation/inst/sql/sql_server/NewUserLNGMirenaLiletta.sql
additionalEstimationPackage/IUDClaimsEstimation/inst/sql/sql_server/NewUserLNGPreventiveHealth.sql
additionalEstimationPackage/IUDClaimsEstimation/inst/sql/sql_server/NewUserLNGSkylaKyleena.sql
additionalEstimationPackage/IUDClaimsEstimation/man/IUDClaimsStudy.Rd
additionalEstimationPackage/IUDClaimsEstimation/man/createCohorts.Rd
additionalEstimationPackage/IUDClaimsEstimation/man/execute.Rd
additionalEstimationPackage/IUDClaimsEstimation/man/exportResults.Rd
additionalEstimationPackage/IUDClaimsEstimation/man/generateDiagnostics.Rd
additionalEstimationPackage/IUDClaimsEstimation/man/launchEvidenceExplorer.Rd
additionalEstimationPackage/IUDClaimsEstimation/man/prepareForEvidenceExplorer.Rd
additionalEstimationPackage/IUDClaimsEstimation/man/runCohortMethod.Rd
additionalEstimationPackage/IUDClaimsEstimation/man/submitResults.Rd
additionalEstimationPackage/IUDClaimsEstimation/man/synthesizePositiveControls.Rd
documents/IUD Cervical Neoplasms Estimation Protocol.docx
documents/README.md
extras/CodeToRun.R
extras/PackageMaintenance.R
inst/cohorts/Alt_High_Grade_Cervical_Neoplasm.json
inst/cohorts/CuIUD.json
inst/cohorts/Cu_Cervical_Cancer_Screen.json
inst/cohorts/Cu_Preventive_Health.json
inst/cohorts/LNGIUS.json
inst/cohorts/LNG_Cervical_Cancer_Screen.json
inst/cohorts/LNG_Mirena_Liletta.json
inst/cohorts/LNG_Preventitive_Health.json
inst/cohorts/LNG_Skyla_Kyleena.json
inst/settings/CohortsToCreate.csv
inst/settings/NegativeControls.csv
inst/settings/StudySpecification.json
inst/settings/TcosOfInterest.csv
inst/settings/cmAnalysisList.json
inst/shiny/EvidenceExplorer/DataPulls.R
inst/shiny/EvidenceExplorer/EvidenceExplorer.Rproj
inst/shiny/EvidenceExplorer/PlotsAndTables.R
inst/shiny/EvidenceExplorer/Table1Specs.csv
inst/shiny/EvidenceExplorer/global.R
inst/shiny/EvidenceExplorer/server.R
inst/shiny/EvidenceExplorer/ui.R
inst/sql/sql_server/Alt_High_Grade_Cervical_Neoplasm.sql
inst/sql/sql_server/CreateCohortTable.sql
inst/sql/sql_server/Cu-IUDHighGradeCIN.sql
inst/sql/sql_server/CuCervicalCancerScreen.sql
inst/sql/sql_server/CuIUD.sql
inst/sql/sql_server/CuIUDPrimaryInvasiveCervicalCancer.sql
inst/sql/sql_server/CuPreventiveHealth.sql
inst/sql/sql_server/CumulativeIncidence.sql
inst/sql/sql_server/GetCounts.sql
inst/sql/sql_server/GetCountsPerYear.sql
inst/sql/sql_server/LNG-IUSHighGradeCIN.sql
inst/sql/sql_server/LNG-IUSPrimaryInvasiveCervicalCancer.sql
inst/sql/sql_server/LNGCervicalCancerScreen.sql
inst/sql/sql_server/LNGIUS.sql
inst/sql/sql_server/LNGMirenaLiletta.sql
inst/sql/sql_server/LNGPreventiveHealth.sql
inst/sql/sql_server/LNG_Skyla_Kyleena.sql
inst/sql/sql_server/NegativeControlOutcomes.sql
man/IUDEHRStudy.Rd
man/createCohorts.Rd
man/execute.Rd
man/exportResults.Rd
man/generateDiagnostics.Rd
man/launchEvidenceExplorer.Rd
man/prepareForEvidenceExplorer.Rd
man/runCohortMethod.Rd
man/submitResults.Rd
man/synthesizePositiveControls.Rd
