queryNeotoma: Get Climate Data for Neotoma Occurrences

In cyber4paleo/coorClimR: Get Gridded Climate Data at Individual Space-Time Locations

Description

Get Climate Data for Neotoma Occurrences

Usage

queryNeotoma(taxonname, ageold = "", ageyoung = "", loc = "", gpid = "",
  altmin = "", altmax = "", producer = "", model = "",
  modelVersion = "", variableType = "", variableUnits = "",
  variablePeriod = "", variablePeriodType = "", averagingPeriod = "",
  averagingPeriodType = "", resolution = "")

Arguments

taxonname	String The name of the taxonomic grouping that you wish tok query neotoma for. Matches a taxon in the neotoma database
ageold	Integer Oldest age, as calendar years before present, to include in results from neotoma.
ageyoung	Integer Youngest age, as calendar years before present, to include in results.
loc	A list of the form longitudeWest, latitudeSouth, longitudeEast, latitudeNorth that represents a bounding box in which to search for occurrences in Neotoma
gpid	Integer Limit occurrences to a geopolitical entity id. Valid values provided by GeoPoliticalUnits database table in Neotoma.
altmin	Integer Minimum site altitude in meters.
altmax	Integer Maximum site altitude in meters.
model	A string specifying the model from which the climate data was created. Default = "" (all)
modelVersion	A string representing the model version that produced the output. Default = "" (all)
variableType	A string representing the type of variable to return. Default = "" (all)
variableUnits	A string representing the units in which the variables are measures. Default = "" (all)
variablePeriod	An integer representing the measuring period for the variable. Default = "" (all)
variablePeriodType	A string representing the type of measuring period for the variable. Default = "" (all)
averagingPeriodType	A string representing the type of period over which the data has been averaged. Default = "" (all)
resolution	A double precision value representing the native resolution at which the climate data was produced and stored. Default = "" (all)
averaingPeriod	An integer representing the period of which the data has been averaged. Default= "" (all)

Value

Outputs a data.frame representation of the api response. Columns: From Database: variableunits, variablePeriodType, VariableType, variableID, Producer, sourceID, ModelVersion, tableName, VariableDescription, averagingPeriod, averagingPeriodType, Model, tableName Optional Identifiers: siteName, sampleID, siteID Response Values: value, latitude, longitude, yearsBP

Examples

queryNeotoma("bison bison")
queryNeotoma("sedum", altmax=1500, variablePeriod=1, resolution=0.5)

cyber4paleo/coorClimR documentation built on May 14, 2019, 1:38 p.m.