R/extrac_quality.R
In czhu/R_nanopore: Analysing Nanopore RNA-seq data
Defines functions
extrac_quality
extrac_quality = function(sr, index=1:100,rev=FALSE) {
l=as(PhredQuality(quality(fq)),"IntegerList")
hist(sapply(l,median),100)
mat = as.matrix(l)
boxplot(mat[,1:1000])
}
czhu/R_nanopore documentation built on Dec. 19, 2021, 7:10 p.m.
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Defines functions extrac_quality
extrac_quality = function(sr, index=1:100,rev=FALSE) {
l=as(PhredQuality(quality(fq)),"IntegerList")
hist(sapply(l,median),100)
mat = as.matrix(l)
boxplot(mat[,1:1000])
}
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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