JASPAR2022-class: JASPAR2022 object class
In da-bar/JASPAR2022: Data package for JASPAR database (version 2022)

JASPAR2022-class

R Documentation

JASPAR2022 object class

Description

The JASPAR2022 object class is a thin class for storing the path of JASPAR2022 style SQLite file.

Slots

db: Object of class "character" a character string of the path of SQLite file.

Author(s)

Damir Baranasic

Examples

library(TFBSTools)
opts <- list()
opts[["species"]] <- 9606
opts[["type"]] <- "SELEX"
opts[["all_versions"]] <- TRUE
PFMatrixList <- getMatrixSet(JASPAR2022, opts)

opts2 <- list()
opts2[["type"]] <- "SELEX"
PFMatrixList2 <- getMatrixSet(JASPAR2022, opts2)

da-bar/JASPAR2022 documentation built on March 19, 2022, 10:49 a.m.