API for daewoooo/SVbyEye
Visualization of genomic structural variants

Global functions
%>%	Man page
StatMiropeats	Man page
StatWideArc	Man page
add.control.points	Man page Source code
add.widearc.controls.points	Source code
addAlignments	Man page Source code
addAnnotation	Man page Source code
addSelfAlignments	Man page Source code
breakPaf	Man page Source code
breakPafAlignment	Man page Source code
cigar2ranges	Man page Source code
collapsePaf	Man page Source code
disjoinPafAlignments	Man page Source code
fasta2nucleotideContent	Man page Source code
filterPaf	Man page Source code
flipPaf	Man page Source code
flipQueryAnnotation	Man page Source code
geom_arrowhead	Man page Source code
geom_miropeats	Man page Source code
geom_roundrect	Man page Source code
geom_wide_arc	Man page Source code
getAnnotationLevels	Man page Source code
getColorScheme	Man page Source code
getNucleotideContent	Man page Source code
liftRangesToAlignment	Man page Source code
makeContent.arrowheadtree	Source code
makeContent.roundrecttree	Source code
maskFASTA	Man page Source code
messageU	Source code
mirrorRanges	Man page Source code
nucmer2PAF	Man page Source code
paf2FASTA	Man page Source code
paf2continuousScale	Man page Source code
paf2coords	Man page Source code
paf2gaps	Man page Source code
paf2nucleotideContent	Man page Source code
pafAlignmentToBins	Man page Source code
pafToBins	Man page Source code
parseCigarString	Man page Source code
plotAVA	Man page Source code
plotGenome	Man page Source code
plotMiro	Man page Source code
plotSelf	Man page Source code
processPafTags	Man page Source code
q2t	Man page Source code
readPaf	Man page Source code
regions2FASTA	Man page Source code
reportGaps	Man page Source code
simpledotplot	Man page Source code
startTimedMessage	Source code
stopTimedMessage	Source code
subsetPaf	Man page Source code
subsetPafAlignments	Man page Source code
syncRangesDir	Man page Source code