Man pages for dalejbarr/RR53
Reanalysis of "A functional genomic perspective on well-being"
| downloadRR53Data | Download the data from PNAS and save it locally as a file |
| generateVCMatrix | Generate variance-covariance matrix for gene expression data |
| getGeneResids | Compute the residual gene expression values |
| meanAbsCor | Compute the mean absolute correlation for a correlation... |
| oneSampTest | Perform a one sample t-test on the beta values |
| readData | Read in the data from Fredrickson et al. |
| readTidyData | Read in and tidy the data from Fredrickson et al. |
| rr53 | Run 53 repeated regressions as in Fredrickson et al. |
| rr53Resids | Run the RR53 analysis on the gene expression residuals |
| runLM | Fit a linear model to expression data for a single gene |
| shuffleAndRecomputeMAC | Compute MAC after randomly shuffling columns |
| shuffleSubjects | Shuffle subject identifiers |
| simulateGeneData | Generate simulated gene expresion data |
| simulatePsychometricData | Randomly generate psychometric/demographic data |
