coerceObj-methods: Method coerceObj.

In dami82/mutSignatures: Decipher Mutational Signatures from Somatic Mutational Catalogs

Method coerceObj.

Description

Cast an object to a different format, by extracting and returning the most appropriate information. Note that data.frames can be coerced to one of the classes defined in the mutSignatures package using coerceObj.

Usage

coerceObj(x, to, ...)

## S4 method for signature 'mutFrameworkParams,character'
coerceObj(x, to)

## S4 method for signature 'mutationSignatures,character'
coerceObj(x, to)

## S4 method for signature 'mutationCounts,character'
coerceObj(x, to, ...)

## S4 method for signature 'mutSignExposures,character'
coerceObj(x, to, ...)

## S4 method for signature 'data.frame,character'
coerceObj(x, to, ...)

Arguments

x	an object to coerce to a different format
to	string, indicates the expected format (such as list or data.frame)
...	additional parameters passed to the functions used for the coercion

dami82/mutSignatures documentation built on Jan. 24, 2023, 12:21 a.m.