make_newick: Create a newick for the given dataset.

View source: R/make_newick.R

make_newickR Documentation

Create a newick for the given dataset.

Description

Create a newick for the given dataset.

Usage

make_newick(df)

Arguments

df

A dataframe either enriched with by the build_Lifemap function or containing at least two columns :

  • "taxid" containing NCBI format taxids

  • "ancestor" containing for each taxid, it's direct ancestor in the phylogeny

Value

A character string.


damiendevienne/lifemapr documentation built on April 12, 2025, 10:47 a.m.