Man pages for dandewaters/VCF2Ploidy
VCF File Converter
| analyze_locus | Extract Locus Information from VCF Data for HAD Format |
| analyze_locus_colony | Extract Locus Information from VCF Data for COLONY Format |
| count_metadata_lines | Count number of metadata lines in VCF files |
| handle_vcf2ploidy_args | Handle Arguments for vcf2ploidy from Shiny Input |
| make_example_vcf_file | Generate a basic example VCF file |
| make_locus | Generate Random Locus Data |
| make_specimen_names | Generate specimen names |
| read_vcf | Read in VCF files |
| vcf2colony | Convert Raw VCF Data to COLONY Format |
| vcf2had | Convert Raw VCF Data to HAD Format |
| vcf2ploidy | Estimate ploidy directly from VCF files |
| vcf2ploidy_app | vcf2ploidy Shiny Application |
