prev: Calculate prevalence from numeric vector
In david-barnett/microViz: Microbiome Data Analysis and Visualization
View source: R/heatmap-utils.R
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Calculate prevalence from numeric vector
Description
Useful as helper for taxon prevalence calculation
Usage
prev(x, undetected = 0)
Arguments
x
numeric vector (of taxon counts or proportions)
undetected
value above which a taxon is considered present or detected
Value
numeric value
Examples
prev(c(0, 0, 1, 2, 4))
prev(c(0, 0, 1, 2, 4), undetected = 1.5)
david-barnett/microViz documentation built on April 17, 2025, 4:25 a.m.
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View source: R/heatmap-utils.R
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Calculate prevalence from numeric vector
Description
Useful as helper for taxon prevalence calculation
Usage
prev(x, undetected = 0)
Arguments
x |
numeric vector (of taxon counts or proportions) |
undetected |
value above which a taxon is considered present or detected |
Value
numeric value
Examples
prev(c(0, 0, 1, 2, 4))
prev(c(0, 0, 1, 2, 4), undetected = 1.5)
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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