fyfit.plot: Plotting pdf of forward detection distances.

In david-borchers/hmltm: Line transect estimation with hidden Markov availability models

Plotting pdf of forward detection distances.

Description

Plots pdf of forward detection distances (f(y)) averaged over detectoins on top of forward detection distance distribution.

Usage

fyfit.plot(
  hmltm,
  values = TRUE,
  breaks = NULL,
  allx = FALSE,
  nys = 250,
  xlab = "Forward distance (y)",
  ylab = "pdf(y)",
  main = "",
  ylim = NULL,
  theta.b = 90,
  text.cex = 0.66,
  doplot = TRUE,
  trackprogress = FALSE
)

Arguments

hmltm	object produced by est.hmltm.
values	If TRUE, returns function values used in plot.
breaks	histogram break points.
allx	If TRUE, returns matrix with p(see at y, given x) for each x in data in hmmlt (dashed gray lines).
nys	number of y-values to use in plotting, spaced equally from 0 to hmmlt$fitsurvey.pars$ymax.
xlab	x-axis label.
ylab	y-axis label.
main	title.
ylim	y-value limits.
theta.b	REDUNDANT must = 90.
text.cex	relative text size.
doplot	If FALSE, does not produce a plot, else does.
trackprogress	If TRUE, prints line for each of the x-values for which the function is computed, as it is computed.

david-borchers/hmltm documentation built on Oct. 29, 2023, 9:07 p.m.