Man pages for david-borchers/secrgam
Spatially Explicit Capture-Recapture with Generalised Additive Density Models
| addcov2mask | Add covariates to mask from raster data |
| add.covariate.bases | Add basis functions to attr(mask,"covariates"). |
| AIC.secrgam | Compare SECRgam models. |
| AIC.secrlist | Prints AIC table using AIC.secr output as input. |
| Boland.alt | Altitudes in the Boland. |
| Boland.alt.image | Altitudes in the Boland (in fromat for plotting). |
| Boland.fits1 | SECR models fitted to 'Boland.CH1'. |
| Boland.fits2 | SECR models fitted to 'Boland.CH2'. |
| Boland.landuse | Land use class in the Boland. |
| Boland.landuse.image | Land use class in the Boland (in fromat for plotting). |
| Boland.leopards1 | Simulated data from 2010 camera-trap survey of leopards in... |
| Boland.leopards2 | Simulated data from a more extensive simulated survey than... |
| derived | Derived density calculation for secrgam objects |
| esa | Effective survey area calculation for secrgam objects |
| fitted.secrgam | Get fitted density values from an secrgam model |
| fxi.secrgam | Probability Density of Home Range Centre |
| image.mask | Image plot of mask object. |
| make.density.design.matrix | Construct a design matrix from a density model |
| plotDgam | SECR Density spline plotting. |
| plot.secrgam | Plot fitted density surface or detection function |
| prep4image | Prepares data frame for plotting with image/contour/persp. |
| prepare.mask.bases | Add spline basis functions to mask covariates. |
| region.ND | Abundance and Density in a region. |
| secrgam.fit | SECR fit with flexible Density models - beta version. |
| secrgam-package | SECR with Density Surface GAMs |
| sim.popn.secrgam | Generate a population using any density formula |
| trap.covar | Returns covariate values of mask point closest to each trap. |
| WCape.alt | Altitudes in Western Cape. |
| WCape.alt.image | Altitudes in Western Cape (in fromat for plotting). |
