prevalenceTRB: Prevalence of T cell receptor beta CDR3 amino acid sequences
In davidcoffey/LymphoSeqDB: LymphoSeq annotation databases
Description
Usage
Format
Source
Description
A database of unique productive T cell receptor beta CDR3 amino acid
sequences from the peripheral blood of 55 healthy individuals, age range
0-90 years.
Usage
1
Format
A dataframe with 11,724,292 rows and 2 columns. The first column
corresponds to T cell receptor beta CDR3 amino acid sequences. The second
column corresponds to the % frequency that the sequence appeared within the
peripheral blood of 55 healthy individuals.
Source
Sequencing from 39 individuals, age ranging from 0-90 years, was
obtained from Britanova, O. V. et al. The Journal of Immunology 2014; 192:
2689-2698 (http://mitcr.milaboratory.com/datasets/aging2013/).
Sequencing for the the remaining 16 individuals, age range from 17-67 years,
was obtained from "Origin and evolution of the T-cell repertoire after
posttransplantation cyclophosphamide"
(https://clients.adaptivebiotech.com/publishedProjects).
davidcoffey/LymphoSeqDB documentation built on May 14, 2019, 11:09 p.m.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Description Usage Format Source
Description
A database of unique productive T cell receptor beta CDR3 amino acid sequences from the peripheral blood of 55 healthy individuals, age range 0-90 years.
Usage
1 |
Format
A dataframe with 11,724,292 rows and 2 columns. The first column corresponds to T cell receptor beta CDR3 amino acid sequences. The second column corresponds to the % frequency that the sequence appeared within the peripheral blood of 55 healthy individuals.
Source
Sequencing from 39 individuals, age ranging from 0-90 years, was obtained from Britanova, O. V. et al. The Journal of Immunology 2014; 192: 2689-2698 (http://mitcr.milaboratory.com/datasets/aging2013/). Sequencing for the the remaining 16 individuals, age range from 17-67 years, was obtained from "Origin and evolution of the T-cell repertoire after posttransplantation cyclophosphamide" (https://clients.adaptivebiotech.com/publishedProjects).
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
Embedding an R snippet on your website
Add the following code to your website.
For more information on customizing the embed code, read Embedding Snippets.