R/odkc_tt_as_wastd_lte.R

Defines functions odkc_tt_as_wastd_lte

Documented in odkc_tt_as_wastd_lte

#' Transform odkc_data$track_tally into WAStD LineTransectEncounters.
#'
#' @param data A tibble of parsed ODKC Track Tallies,
#'   e.g. \code{odkc_data$track_tally}.
#' @param user_mapping .
#' @return A tibble suitable to
#'   \code{\link{wastd_POST}("line-transect-encounters")}
#' @export
#' @examples
#' \dontrun{
#' data("odkc_data", package = "wastdr")
#' user_mapping <- NULL # see odkc_plan for actual user mapping
#'
#' odkc_data$track_tally %>%
#'   odkc_tt_as_wastd_lte(user_mapping) %>%
#'   head(1) %>%
#'   jsonlite::toJSON()
#' }
odkc_tt_as_wastd_lte <- function(data, user_mapping) {
  wastd_reporters <- user_mapping %>%
    dplyr::transmute(reporter = odkc_username, reporter_id = pk)

  wastd_observers <- user_mapping %>%
    dplyr::transmute(observer = odkc_username, observer_id = pk)

  data %>%
    dplyr::mutate(transect = sf::st_as_text(tx)) %>%
    wastdr::sf_as_tbl() %>%
    dplyr::transmute(
      source = "odk", # wastd.observations.models.SOURCE_CHOICES
      source_id = id,
      observer = reporter %>%
        stringr::str_squish() %>%
        stringr::str_to_lower(),
      reporter = observer,
      where = glue::glue(
        "POINT ({overview_location_longitude}",
        " {overview_location_latitude})"
      ),
      location_accuracy = "10",
      # ODKC v0.6 returns ODK linestring > wastdr > ST linestring w/o acc
      # location_accuracy_m = details_observed_at_accuracy,
      when = lubridate::format_ISO8601(observation_start_time, usetz = TRUE),
      transect = transect
    ) %>%
    dplyr::left_join(wastd_reporters, by = "reporter") %>% # WAStD User PK
    dplyr::left_join(wastd_observers, by = "observer") %>% # WAStD User PK
    dplyr::select(-reporter, -observer) # drop odkc_username
}

# usethis::use_test("odkc_tt_as_wastd_lte")
dbca-wa/etlTurtleNesting documentation built on Nov. 18, 2022, 8:03 a.m.