sim_p: Simulate genotypes at equilibrium

In dcgerard/phwelike: Code from Jiang, Ren, and Wu (2021) in Package Form

Simulate genotypes at equilibrium

Description

There is a mistake in Jiang et al (2021) and these genotypes are not actually simulated at equilibrium. See Gerard (2022) for details.

Usage

sim_p(para, n = 500)

Arguments

para	A vector of length 2. The first element is the allele frequency, the second element is the double reduction parameter.
n	The number of individuals to sample.

Author(s)

Libo Jiang

References

• Jiang, Libo, Xiangyu Ren, and Rongling Wu. 2021. "Computational Characterization of Double Reduction in Autotetraploid Natural Populations." The Plant Journal 105 (6): 1703–9. doi: 10.1111/tpj.15126

• Gerard D 2022. "Double reduction estimation and equilibrium tests in natural autopolyploid populations." Biometrics In press. doi: 10.1111/biom.13722.

dcgerard/phwelike documentation built on July 27, 2022, 8:07 a.m.