get_phred: get_phred

Description Usage Arguments

Description

returns the phred type for a set of FASTQ files.

Usage

1
get_phred(filenames, nlines = 1000)

Arguments

filenames

character vector with the names of the files.

nlines

number of files in the FASTQ file used to guess the phred.


ddiez/ngstools documentation built on May 15, 2019, 1:52 a.m.