dcq: dcq

Description Usage Arguments Value Examples

Description

Perform Digital Cell Quantification

Usage

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dcq(x, db = db, alpha = 0.05, lambda.min.ratio = 0.2,
  nlambda = 100)

Arguments

x

matrix of expression levels.

db

databases of expression levels for markers.

alpha

parameter passed to glmnet.

lambda.min.ratio

parameter passed to glmnet.

nlambda

parameter passed to glmnet.

Value

A matrix with cell abundances.

Examples

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ddiez/rdcq documentation built on May 15, 2019, 1:52 a.m.