do.differential.expression.analyis: A method

In decusInLabore/biologicSeqTools2: Seq Analysis Helper Functions

A method

Description

Method description

Usage

do.differential.expression.analyis(
  raw.counts.filt = raw.counts.filt,
  DEseq2Dir = paste0(localWorkDir, "DESeq2"),
  df.design = df.design,
  gene.id = "ENSMUSG",
  batch.mode = FALSE,
  parallel = FALSE,
  toBeNormalized = TRUE,
  plotOutputDir = "",
  doPCA = TRUE,
  writePlotsToFile = TRUE,
  timeseries = FALSE,
  tempShellScriptVector = as.vector(NULL, mode = "character")
)

Arguments

agree

TBD

decusInLabore/biologicSeqTools2 documentation built on Nov. 21, 2024, 9:04 p.m.