calcyt_binary: Node color visualization

calcyt_binaryR Documentation

Node color visualization

Description

Visualizing a metric with node color. This functions works well for a comparison of two conditions e.g. log2(treatment/control).

Usage

calcyt_binary(x, y)

Arguments

x

experimental data as a dataframe, compounds in rows, samples in columns

y

name of the metric to visualize

Value

Cytoscape network with node color representing the metric of interest

Examples

x <- data_to_plot
y <- 'log2(treatment/control)'
calcyt_binary(data_to_plot,'log2(treatment/control)')

delfarahalireza/calcyt documentation built on April 28, 2022, 12:05 a.m.