View source: R/flex_negllh_var.R
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1 2 | flex_negllh_var(params, nPBT, nGSI, ohnc, t, utGSI, ohnc_gsi, utVar,
ohnc_var, nCat)
|
params |
vector of paramaters to optimize |
nPBT |
number of pbt groups to estimate |
nGSI |
number of GSI groups to estimate |
ohnc |
vector of number of observed (PBT assigned) hatchery fish in each PBT and GSI group (gsi groups should be 0) |
t |
vector of tag rates for all PBT and GSI groups (gsi groups should be 0) |
utGSI |
vector of number of un-PBT assigned fish in each GSI group |
ohnc_gsi |
matrix of counts of fish GSI assigned to various groups |
utVar |
matrix of numbers of un-PBT assigned fish in each GSI group (row) x category of the variable (column) |
ohnc_var |
matrix of counts of PBT-assigned fish in each category (rows are PBT groups) |
nCat |
the numbers of categories in the variable |
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