cv_cal: Build the H-matrix from G-inverse-matrix and pedigree-full...
In dengfei2013/GS: Help to prepare the data to analysis the Genomic data in GS
Description
Usage
Arguments
Value
Examples
Description
Build the H-matrix from G-inverse-matrix and pedigree-full and pedigree-genotype, It calculate alpha and bera based the function of the matrix G_22 and A_22
Usage
1
cv_cal(dat.csv, h2 = 1)
Arguments
M012
It is the matrix which has rownames(ID), the first column is SNP infor, the SNP is 012 format.
ped_full
It contains the full pedigree, it has three columns:ID,Sire,Dam
Value
The H-matrix form the formula
Examples
1
2
library(MASS)
animal <- 13:26
dengfei2013/GS documentation built on May 16, 2019, 7:29 a.m.
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Description Usage Arguments Value Examples
Description
Build the H-matrix from G-inverse-matrix and pedigree-full and pedigree-genotype, It calculate alpha and bera based the function of the matrix G_22 and A_22
Usage
1 | cv_cal(dat.csv, h2 = 1)
|
Arguments
M012 |
It is the matrix which has rownames(ID), the first column is SNP infor, the SNP is 012 format. |
ped_full |
It contains the full pedigree, it has three columns:ID,Sire,Dam |
Value
The H-matrix form the formula
Examples
1 2 | library(MASS)
animal <- 13:26
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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