Files in devSJR/PCRedux
Quantitative Polymerase Chain Reaction (qPCR) Data Mining and Machine Learning Toolkit

.Rbuildignore

.github/workflows/draft-pdf.yml

.gitignore

.travis.yml

CHANGELOG

CONTRIBUTING.md

CRAN-SUBMISSION

DESCRIPTION

LICENSE

NAMESPACE

NEWS

R/PCRedux.R R/armor.R R/autocorrelation_test.R R/decision_modus.R R/earlyreg.R R/encu.R R/head2tailratio.R R/hookreg.R R/hookregNL.R R/humanrater.R R/mblrr.R R/pcrfit_single.R R/performeR.R R/qPCR2fdata.R R/run_PCRedux.R R/tReem.R R/utils.R R/winklR.R README.md cran-comments.md

data/RAS002.rda

data/RAS002_decisions.rda

data/data_sample.rda

data/datalist

data/decision_res_kbqPCR.rda

data/kbqPCR.rda

docs/404.html

docs/LICENSE-text.html

docs/articles/PCRedux.html

docs/articles/PCRedux_files/figure-html/HCU32-1.png

docs/articles/PCRedux_files/figure-html/amplification_curve_ROI-1.png

docs/articles/PCRedux_files/figure-html/autocorrelation-1.png

docs/articles/PCRedux_files/figure-html/curve_fit_fail-1.png

docs/articles/PCRedux_files/figure-html/earlyreg_slopes-1.png

docs/articles/PCRedux_files/figure-html/figure_cpD2_range-1.png

docs/articles/PCRedux_files/figure-html/figure_curve_classification-1.png

docs/articles/PCRedux_files/figure-html/figure_head2tailratio-1.png

docs/articles/PCRedux_files/figure-html/figure_quantification_points-1.png

docs/articles/PCRedux_files/figure-html/figure_sigmoid_curve-1.png

docs/articles/PCRedux_files/figure-html/figure_sigmoid_curve_models-1.png

docs/articles/PCRedux_files/figure-html/htPCR_nap-1.png

docs/articles/PCRedux_files/figure-html/htPCR_nap_frequency-1.png

docs/articles/PCRedux_files/figure-html/loglin_slope-1.png

docs/articles/PCRedux_files/figure-html/plot_FFTrees-1.png

docs/articles/PCRedux_files/figure-html/plot_Logistic_Regression-1.png

docs/articles/PCRedux_files/figure-html/plot_bg_pt-1.png

docs/articles/PCRedux_files/figure-html/plot_cp_area-1.png

docs/articles/PCRedux_files/figure-html/plot_cpa-1.png

docs/articles/PCRedux_files/figure-html/plot_dat_EffTop-1.png

docs/articles/PCRedux_files/figure-html/plot_mblrr-1.png

docs/articles/PCRedux_files/figure-html/plot_models-1.png

docs/articles/PCRedux_files/figure-html/plot_random_forest-1.png

docs/articles/PCRedux_files/figure-html/plot_sd_bg-1.png

docs/articles/PCRedux_files/figure-html/qPCR2fdata-1.png

docs/articles/PCRedux_files/figure-html/statistical_methods_amptester-1.png

docs/articles/PCRedux_files/figure-html/unnamed-chunk-11-1.png

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docs/articles/PCRedux_files/figure-html/unnamed-chunk-9-1.png

docs/articles/PCRedux_files/figure-html/winklR-1.png

docs/articles/SI1.html

docs/articles/SI1_files/figure-html/ampcurves-1.png

docs/articles/index.html

docs/authors.html

docs/docsearch.css

docs/docsearch.js

docs/index.html

docs/link.svg

docs/pkgdown.css

docs/pkgdown.js

docs/pkgdown.yml

docs/reference/PCRedux-package.html

docs/reference/PCRedux_datasets.rd

docs/reference/autocorrelation_test-1.png

docs/reference/autocorrelation_test.html

docs/reference/decision_modus.html

docs/reference/earlyreg-1.png

docs/reference/earlyreg.html

docs/reference/encu.html

docs/reference/head2tailratio-1.png

docs/reference/head2tailratio.html

docs/reference/hookreg-1.png

docs/reference/hookreg.html

docs/reference/hookregNL.html

docs/reference/index.html

docs/reference/mblrr.html

docs/reference/pcrfit_single.html

docs/reference/performeR-1.png

docs/reference/performeR.html

docs/reference/qPCR2fdata-1.png

docs/reference/qPCR2fdata.html

docs/reference/run_PCRedux.html

docs/reference/tReem.html

docs/reference/winklR-1.png

docs/reference/winklR-2.png

docs/reference/winklR-3.png

docs/reference/winklR-4.png

docs/reference/winklR-5.png

docs/reference/winklR.html

inst/HCU32_aggR.csv

inst/PCRedux_gui/example_dat.csv

inst/PCRedux_gui/functions.R inst/PCRedux_gui/init_remote.R inst/PCRedux_gui/readme.md inst/PCRedux_gui/server.R inst/PCRedux_gui/ui.R

inst/PCRedux_gui/www/collapsing.js

inst/PCRedux_gui/www/detect-element-resize.js

inst/PCRedux_gui/www/fonts/Montserrat-Light.ttf

inst/PCRedux_gui/www/fonts/Montserrat-SemiBold.ttf

inst/PCRedux_gui/www/fonts/RobotoMono-Regular.ttf

inst/PCRedux_gui/www/logo.png

inst/PCRedux_gui/www/resize-logo-panel.js

inst/PCRedux_gui/www/theme.css

inst/RAS002.rdml

inst/RAS003.rdml

inst/Table_human_rated.xlsx

inst/WORDLIST

inst/decision_res_C126EG595.csv

inst/decision_res_C127EGHP.csv

inst/decision_res_C316.amp.csv

inst/decision_res_C317.amp.csv

inst/decision_res_C60.amp.csv

inst/decision_res_CD74.csv

inst/decision_res_HCU32_aggR.csv

inst/decision_res_RAS002.csv

inst/decision_res_RAS003.csv

inst/decision_res_VIMCFX96_60.csv

inst/decision_res_batsch1.csv

inst/decision_res_batsch2.csv

inst/decision_res_batsch3.csv

inst/decision_res_batsch4.csv

inst/decision_res_batsch5.csv

inst/decision_res_boggy.csv

inst/decision_res_competimer.csv

inst/decision_res_dil4reps94.csv

inst/decision_res_guescini1.csv

inst/decision_res_guescini2.csv

inst/decision_res_htPCR.csv

inst/decision_res_karlen1.csv

inst/decision_res_karlen2.csv

inst/decision_res_karlen3.csv

inst/decision_res_lc96_bACTXY.csv

inst/decision_res_lievens1.csv

inst/decision_res_lievens2.csv

inst/decision_res_lievens3.csv

inst/decision_res_reps.csv

inst/decision_res_reps2.csv

inst/decision_res_reps3.csv

inst/decision_res_reps384.csv

inst/decision_res_rutledge.csv

inst/decision_res_stepone_std.csv

inst/decision_res_testdat.csv

inst/decision_res_vermeulen1.csv

inst/decision_res_vermeulen2.csv

inst/hookreg.rdml

inst/humanrater2/server.R inst/humanrater2/ui.R

joss/fig_1.png

joss/fig_2.png

joss/paper.bib

vignettes/Logo.png

vignettes/MIT.svg

vignettes/PCRedux.Rmd

vignettes/literature.bib

vignettes/treem.png

devSJR/PCRedux documentation built on Aug. 3, 2022, 1:34 p.m.

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devSJR/PCRedux
Quantitative Polymerase Chain Reaction (qPCR) Data Mining and Machine Learning Toolkit

Files in devSJR/PCRedux
Quantitative Polymerase Chain Reaction (qPCR) Data Mining and Machine Learning Toolkit

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devSJR/PCRedux Quantitative Polymerase Chain Reaction (qPCR) Data Mining and Machine Learning Toolkit

Files in devSJR/PCRedux Quantitative Polymerase Chain Reaction (qPCR) Data Mining and Machine Learning Toolkit

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We want your feedback!

devSJR/PCRedux
Quantitative Polymerase Chain Reaction (qPCR) Data Mining and Machine Learning Toolkit

Files in devSJR/PCRedux
Quantitative Polymerase Chain Reaction (qPCR) Data Mining and Machine Learning Toolkit