Dynamic MultivariatE Data Analysis and VIsUalization PlatforM
source("http://pastebin.com/raw.php?i=UyDBTA57")
Browser-based GUI for devium implemented in R and Shiny (under development).
Check out some prototypes and examples of the analyses implemented in Devium
on the demo server.
- Heirarchical Cluster Analysis
- [Basic Plotting] (http://spark.rstudio.com/dgrapov/Plotting/)
- [Principal Components Analysis Diagnostics] (http://spark.rstudio.com/dgrapov/PCA/)
- Metabolomic Network Generation
(obsolete see DeviumWeb) - GUI using RGtk2 toolkit implemented with gWidgests
Dynamic plotting - base and ggplot2
Linked brushing of multiple plots - iplots
Network Visualizations - igraph (static, interactive and 3D), Cytoscape (RCytoscape)
Analyses - univariate and multivariate
Automated report generation - rsweave
Data import and linking with MS Excel and Google Spreadsheets
Successor to imDEV, including improved interface and capabilities
Eventually devium will be installed from R as a package and from alternative repositories where it can be bundled with GTK+ components. For now it can be installed by using the source code in the devium/R directory. Copy and paste the following code in to R to source the necessary files.
```r #load package from github repo source("http://pastebin.com/raw.php?i=JVyTrYRD")
objects()
devium.gui()
``` Note if you don't yet have the GTK+ toolkit installed you need to specify to "Install GTK+" when prompted from the R command line.
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