Quantification of Fate Bias in Multipotent Progenitors

compdr | Computation of dimensional reduction representations |

diffexpnb | Function for differential expression analysis |

dptTraj | Inferenence of diffusion pseudotime (DPT) for all cells on a... |

fateBias | Computation of fate bias |

filterset | Function filtering expression data |

gene2gene | Comparative plot of the expression levels of two genes |

getFeat | Feature selection based on differentially expressed genes |

getPart | Inference of a cell type partition |

getsom | Topological ordering of pseudo-temporal expression profiles |

impGenes | Extract genes with high importance values for random forest... |

intestine | Single-cell transcriptome data of intestinal epithelial cells |

plotdiffgenesnb | Function for plotting differentially expressed genes |

plotexpression | Plotting of pseudo-temporal expression profiles |

plotFateMap | Plot dimensional reduction representation of the expression... |

plotheatmap | Heatmap of expression profiles |

prcurve | Computation of a principal curve for a given dimensional... |

procsom | Processing of self-organizing maps for pseudo-temporal... |

reclassify | Reclassification of cells |

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