compdr | Computation of dimensional reduction representations |
diffexpnb | Function for differential expression analysis |
fateBias | Computation of fate bias |
filterset | Function for filtering expression data |
gene2gene | Comparative plot of the expression levels of two genes |
getFeat | Feature selection based on differentially expressed genes |
getPart | Inference of a cell type partition |
getsom | Topological ordering of pseudo-temporal expression profiles |
impGenes | Extract genes with high importance values for random forest... |
intestine | Single-cell transcriptome data of intestinal epithelial cells |
plotdiffgenesnb | Function for plotting differentially expressed genes |
plotexpression | Plotting of pseudo-temporal expression profiles |
plotexpressionProfile | Plotting smoothed pseudo-temporal expression profiles for... |
plotFateMap | Plot dimensional reduction representation of the expression... |
plotheatmap | Heatmap of expression profiles |
prcurve | Computation of a principal curve for a given dimensional... |
procsom | Processing of self-organizing maps for pseudo-temporal... |
reclassify | Reclassification of cells |
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