plotdistanceratio: Histogram of Cell-to-Cell Distances in Real versus Embedded...
In dgrun/RaceID3_StemID2_package: Identification of Cell Types, Inference of Lineage Trees, and Prediction of Noise Dynamics from Single-Cell RNA-Seq Data
plotdistanceratio R Documentation
Histogram of Cell-to-Cell Distances in Real versus Embedded Space
Description
This function plots a histogram of the ratios of cell-to-cell distances in the original versus the high-dimensional embedded space used as input for
the StemID2 inferences. The embedded space approximates correlation-based distances by Euclidean distances obtained by classical multi-dimensional scaling.
A minimum spanning tree of the cluster centers is overlaid for comparison.
Usage
plotdistanceratio(object)
Arguments
object
Ltree class object.
Value
None.
dgrun/RaceID3_StemID2_package documentation built on Nov. 26, 2024, 4:11 a.m.
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| plotdistanceratio | R Documentation |
Histogram of Cell-to-Cell Distances in Real versus Embedded Space
Description
This function plots a histogram of the ratios of cell-to-cell distances in the original versus the high-dimensional embedded space used as input for the StemID2 inferences. The embedded space approximates correlation-based distances by Euclidean distances obtained by classical multi-dimensional scaling. A minimum spanning tree of the cluster centers is overlaid for comparison.
Usage
plotdistanceratio(object)
Arguments
object |
|
Value
None.
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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